Isoprene is the most abundant biogenic volatile hydrocarbon compound naturally emitted by plants and plays a major role in atmospheric chemistry. It has been proposed that isoprene synthases (IspS) may readily evolve from other terpene synthases, but this hypothesis has not been experimentally investigated. We isolated and functionally validated in Arabidopsis the first isoprene synthase gene, AdoIspS, from a monocotyledonous species (Arundo donax L., Poaceae). Phylogenetic reconstruction indicates that AdoIspS and dicots isoprene synthases most likely originated by parallel evolution from TPS-b monoterpene synthases. Site-directed mutagenesis demonstrated in vivo the functional and evolutionary relevance of the residues considered diagnostic for IspS function. One of these positions was identified by saturating mutagenesis as a major determinant of substrate specificity in AdoIspS able to cause in vivo a dramatic change in total volatile emission from hemi- to monoterpenes and supporting evolution of isoprene synthases from ocimene synthases. The mechanism responsible for IspS neofunctionalization by active site size modulation by a single amino acid mutation demonstrated in this study might be general, as the very same amino acidic position is implicated in the parallel evolution of different short-chain terpene synthases from both angiosperms and gymnosperms. Based on these results, we present a model reconciling in a unified conceptual framework the apparently contrasting patterns previously observed for isoprene synthase evolution in plants. These results indicate that parallel evolution may be driven by relatively simple biophysical constraints, and illustrate the intimate molecular evolutionary links between the structural and functional bases of traits with global relevance.

Li, M.; Xu, J.; Algarra Alarcon, A.; Carlin, S.; Barbaro, E.; Cappellin, L.; Velikova, V.; Vrhovsek, U.; Loreto, F.; Varotto, C. (2017). In planta recapitulation of isoprene synthases evolution from ocimene synthases. MOLECULAR BIOLOGY AND EVOLUTION, 34 (10): 2583-2599. doi: 10.1093/molbev/msx178 handle: http://hdl.handle.net/10449/42528

In planta recapitulation of isoprene synthases evolution from ocimene synthases

Li, M.
Primo
;
Xu, J.;Carlin, S.;Barbaro, E.;Cappellin, L.;Velikova, V.;Vrhovsek, U.;Varotto, C.
Ultimo
2017-01-01

Abstract

Isoprene is the most abundant biogenic volatile hydrocarbon compound naturally emitted by plants and plays a major role in atmospheric chemistry. It has been proposed that isoprene synthases (IspS) may readily evolve from other terpene synthases, but this hypothesis has not been experimentally investigated. We isolated and functionally validated in Arabidopsis the first isoprene synthase gene, AdoIspS, from a monocotyledonous species (Arundo donax L., Poaceae). Phylogenetic reconstruction indicates that AdoIspS and dicots isoprene synthases most likely originated by parallel evolution from TPS-b monoterpene synthases. Site-directed mutagenesis demonstrated in vivo the functional and evolutionary relevance of the residues considered diagnostic for IspS function. One of these positions was identified by saturating mutagenesis as a major determinant of substrate specificity in AdoIspS able to cause in vivo a dramatic change in total volatile emission from hemi- to monoterpenes and supporting evolution of isoprene synthases from ocimene synthases. The mechanism responsible for IspS neofunctionalization by active site size modulation by a single amino acid mutation demonstrated in this study might be general, as the very same amino acidic position is implicated in the parallel evolution of different short-chain terpene synthases from both angiosperms and gymnosperms. Based on these results, we present a model reconciling in a unified conceptual framework the apparently contrasting patterns previously observed for isoprene synthase evolution in plants. These results indicate that parallel evolution may be driven by relatively simple biophysical constraints, and illustrate the intimate molecular evolutionary links between the structural and functional bases of traits with global relevance.
Isoprene synthase evolution
Short-chain terpene synthases parallel evolution
Site-directed mutagenesis
Substrate specificity
Active site size modulation
Ocimene synthase
Settore BIO/02 - BOTANICA SISTEMATICA
2017
Li, M.; Xu, J.; Algarra Alarcon, A.; Carlin, S.; Barbaro, E.; Cappellin, L.; Velikova, V.; Vrhovsek, U.; Loreto, F.; Varotto, C. (2017). In planta recapitulation of isoprene synthases evolution from ocimene synthases. MOLECULAR BIOLOGY AND EVOLUTION, 34 (10): 2583-2599. doi: 10.1093/molbev/msx178 handle: http://hdl.handle.net/10449/42528
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