Pathway Inspector is an easy-to-use web application helping researchers to find patterns of expression in complex RNAseq experiments. The tool combines two standard approaches for RNAseq analysis: the identification of differentially expressed genes and a topology-based analysis of enriched pathways. Pathway Inspector is equipped with ad-hoc interactive graphical interfaces simplifying the discovery of modulated pathways and the integration of the differentially expressed genes in the corresponding pathway topology
Bianco, L.; Riccadonna, S.; Lavezzo, E.; Falda, M.; Formentin, E.; Cavalieri, D.; Toppo, S.; Fontana, P. (2017). Pathway Inspector: a pathway based web application for RNAseq analysis of model and non-model organisms. BIOINFORMATICS, 33 (3): 453-455. doi: 10.1093/bioinformatics/btw636 handle: http://hdl.handle.net/10449/34982
Pathway Inspector: a pathway based web application for RNAseq analysis of model and non-model organisms
Bianco, LucaPrimo
;Riccadonna, Samantha;Cavalieri, Duccio;Fontana, Paolo
Ultimo
2017-01-01
Abstract
Pathway Inspector is an easy-to-use web application helping researchers to find patterns of expression in complex RNAseq experiments. The tool combines two standard approaches for RNAseq analysis: the identification of differentially expressed genes and a topology-based analysis of enriched pathways. Pathway Inspector is equipped with ad-hoc interactive graphical interfaces simplifying the discovery of modulated pathways and the integration of the differentially expressed genes in the corresponding pathway topology
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